PUBLICATION

Professor Dr. Shamshad Zarina

2023	Haneef K, Salim A, Hashim Z, Ilyas A, Syed B, Ahmed A, Zarina S (2023) Chemical Hypoxic Preconditioning Improves Survival and Proliferation of Mesenchymal Stem Cells. Appl Biochem Biotechnol. https://doi.org/10.1007/s12010-023-04743-z
2023	Tanveer F, Ilyas A, Syed B, Hashim Z, Ahmed A, Zarina S (2023) Differential Protein Expression in Response to Varlitinib Treatment in Oral Cancer Cell Line: an In Vitro Therapeutic Approach. Appl Biochem Biotechnol. https://doi.org/10.1007/s12010-023-04642-3
2022	Fazal, Y., Zohaib, M., Syed, B., Ansari, S. H., Hashim, Z., Ahmed, A., & Zarina, S. (2022). Prenatal diagnosis of maternal serum from mothers carrying β‐thalassemic fetus. Pediatrics International, 64(1), e14999.  https://doi.org/10.1111/ped.14999
2021	Mohsin, A., Haneef, K., Ilyas, A., Zarina, S., & Hashim, Z. (2021). Oxidative Stress Induced Cell Cycle Arrest: Potential Role of PRX-2 and GSTP-1 as Therapeutic Targets in Hepatocellular Carcinoma. Protein and Peptide Letters, 28(12), 1323-1329. https://doi.org/10.2174/0929866528666211105105953
2021	Usman, M., Ilyas, A., Syed, B., Hashim, Z., Ahmed, A., & Zarina, S. (2021). Serum HSP90-alpha and oral squamous cell carcinoma: a prospective biomarker. Protein and Peptide Letters, 28(10), 1157-1163. https://doi.org/10.2174/0929866528666210616112539
2020	Hashim, Z., Ilyas, A., & Zarina, S. (2020). Therapeutic effect of hydrogen peroxide via altered expression of glutathione S-transferase and peroxiredoxin-2 in hepatocellular carcinoma. Hepatobiliary & Pancreatic Diseases International, 19(3), 258-265. https://doi.org/10.1016/j.hbpd.2020.03.006
2020	Syed, N., Ilyas, A., Idrees, F., Zarina, S., & Hashim, Z. (2020). Inhibition of USP2 Induces apoptosis through down regulation of fatty acid synthase and Cyclin D1 in triple negative breast cancer. Current Proteomics, 17(5), 425-432. https://doi.org/10.2174/1570164617666191008093522
2020	Usman, M., Ilyas, A., Hashim, Z., & Zarina, S. (2020). Identification of GIMAP7 and Rabl3 as putative biomarkers for oral squamous cell carcinoma through comparative proteomic approach. Pathology & Oncology Research, 26(3), 1817-1822. https://doi.org/10.1007/s12253-019-00775-1
2020	Malik, U. U., Siddiqui, I. A., Ilyas, A., Hashim, Z., Staunton, L., Kwasnik, A., … & Zarina, S. (2020). Identification of differentially expressed proteins from smokeless tobacco addicted patients suffering from Oral squamous cell carcinoma. Pathology & Oncology Research, 26(3), 1489-1497. https://doi.org/10.1007/s12253-019-00724-y
2020	Usman, M., Tanveer, F., Ilyas, A., & Zarina, S. (2020). Varlitinib Mediates Its Activity Through Down Regulating MAPK/EGFR Pathway in Oral Cancer. Current Proteomics, 17(1), 51-58. https://doi.org/10.2174/1570164616666190516114749
2020	Anwar, M. F., Khalid, R., Hasanain, A., Naeem, S., Zarina, S., Abidi, S. H., & Ali, S. (2020). Integrated cheminformatics-molecular docking approach to drug discovery against viruses. Infectious Disorders-Drug Targets (Formerly Current Drug Targets-Infectious Disorders), 20(2), 150-159. https://doi.org/10.2174/1871526518666181019162359
2019	Basharat, A. R., Iman, K., Khalid, M. F., Anwar, Z., Hussain, R., Kabir, H. G., … & Chaudhary, S. U. (2019). BIRL/SPECTRUM: A MATLAB Toolbox for Proteoform Identification from Top-Down Proteomics Data. Sci Rep, 9(1), 11267. https://doi.org/10.1038/s41598-019-47724-1
2019	Syed, N., Ilyas, A., Zarina, S., & Hashim, Z. (2019). Assessment of Anticancer Effect of Alendronate in Breast Cancer: An In vitro Study. J. Biotech. Biomed. Sci, 2(2), 1-7. https://doi.org/10.14302/issn.2576-6694.jbbs-19-2953
2019	Baig, A., Rehman, A. U., & Zarina, S. (2019). Association of PON2 and PON3 polymorphism with risk of developing cataract. Saudi Journal of Ophthalmology, 33(2), 153-158. https://doi.org/10.1016/j.sjopt.2019.05.001
2019	Zohaib, M., Ansari, S. H., Shamsi, T. S., Zubarev, R. A., & Zarina, S. (2019). Pharmacoproteomics profiling of plasma from β‐thalassemia patients in response to hydroxyurea treatment. The Journal of Clinical Pharmacology, 59(1), 98-106. https://doi.org/10.1002/jcph.1297
2018	Anwar, M. F., Zarina, S., Ali, S., & Abidi, S. H. (2018). Two for one: Viral helicases as an ideal target for HIV and HCV co-infection. Medical Hypotheses, 116, 139-140. https://doi.org/10.1016/j.mehy.2018.05.004
2018	Ilyas, A., Hashim, Z., Channa, I. S., & Zarina, S. (2018). Alendronate and FTI-277 combination as a possible therapeutic approach for hepatocellular carcinoma: An in vitro study. Hepatobiliary & Pancreatic Diseases International, 17(3), 241-250. https://doi.org/10.1016/j.hbpd.2018.03.013
2018	Siddiqui, S., Anwar, M. F., Naeem, S., Abidi, S. H., Zarina, S., & Ali, S. (2018). Simian virus 40 large T antigen as a model to test the efficacy of flouroquinolones against viral helicases. Bioinformation, 14(2), 75. https://doi.org/10.6026%2F97320630014075
2017	Lateef, M., Azhar, A., Siddiqui, B. S., Zarina, S., Anwar, M. F., Siddiqui, K., … & Perveen, S. (2017). New anthrarobin acyl derivatives as butyrylcholinesterase inhibitors: synthesis, in vitro and in silico studies. Heliyon, 3(7), e00350. https://doi.org/10.1016/j.heliyon.2017.e00350
2017	Naseeb, U., Zarina, S., Jägerbrink, T., Shafqat, J., Jörnvall, H., & Axelsson, J. (2017). Differential hemoglobin A sequestration between hemodialysis modalities. Biomolecular Concepts, 8(2), 125-129. https://doi.org/10.1515/bmc-2017-0006
2016	Waheed, H., Friedman, H., Moin, S. F., Zarina, S., & Ahmed, A. (2016). The Primary Structure of βI-Chain of Hemoglobin from Snake Sindhi Krait (Bungarus sindanus sindanus). The Protein Journal, 35(3), 193-201. https://doi.org/10.1007/s10930-016-9661-2
2016	Atta, A., Ilyas, A., Hashim, Z., & Zarina, S. (2016). Structure Function Relationship of Lactate Dehydrogenase/[epsilon]-Crystallin from Lenses of Indian Spiny-Tailed Lizard (Uromastyx hardwickii). Pakistan Journal of Zoology, 48(4), 1147-1153.
2016	Atta, A., Hashim, Z., & Zarina, S. (2016). Lens proteomics: exploring adaptive conflict in Uromastyx hardwickii lens proteins. JAPS: Journal of Animal & Plant Sciences, 26(1), 261-268.
2016	Malik, U. U., Zarina, S., & Pennington, S. R. (2016). Oral squamous cell carcinoma: Key clinical questions, biomarker discovery, and the role of proteomics. Archives of oral biology, 63, 53-65. https://doi.org/10.1016/j.archoralbio.2015.11.017
2016	Baig, A., Zohaib, M., Rehman, A. U., & Zarina, S. (2016). Q192R paraoxonase1 polymorphism is a risk factor for cataract in Pakistani population. Pakistan journal of pharmaceutical sciences, 29(3), 765-771.
2016	Zohaib, M., Ansari, S. H., Hashim, Z., Shamsi, T. S., & Zarina, S. (2016). Serum Paraoxonase Activity and Malondialdehyde Serum Concentrations Remain Unaffected in Response to Hydroxyurea Therapy in β‐Thalassemia Patients. The Journal of Clinical Pharmacology, 56(7), 869-874. https://doi.org/10.1002/jcph.675
2016	Atta, A., Ilyas, A., Hashim, Z., & Zarina, S. (2016). Structure Function Relationship of Lactate Dehydrogenase/[epsilon]-Crystallin from Lenses of Indian Spiny-Tailed Lizard (Uromastyx hardwickii). Pakistan Journal of Zoology, 48(4), 1147-1153.
2015	Naseeb, U., Axelsson, J., Jägerbrink, T., Shafqat, J., Zarina, S., & Jörnvall, H. (2015). Complementary LC-MS/MS proteomic analysis of uremic plasma proteins. J Coll Physicians Surg Pak, 25(8), 606-609.
2015	Ilyas, A., Hashim, Z., & Zarina, S. (2015). Effects of 5′-azacytidine and alendronate on a hepatocellular carcinoma cell line: a proteomics perspective. Molecular and Cellular Biochemistry, 405(1), 53-61. https://doi.org/10.1007/s11010-015-2395-1
2014	Malik, U. U., Siddiqui, I. A., Hashim, Z., & Zarina, S. (2014). Measurement of serum paraoxonase activity and MDA concentrations in patients suffering with oral squamous cell carcinoma. Clinica Chimica Acta, 430, 38-42. https://doi.org/10.1016/j.cca.2013.12.033
2014	Dawood, S., Zarina, S., & Bano, S. (2014). Docking studies of antidepressants against single crystal structure of tryptophan 2, 3-dioxygenase using Molegro Virtual Docker software. Pak J Pharm Sci, 27(5), 1529-39.
2014	Ilyas, A., Hashim, Z., Naeem, N., Haneef, K., & Zarina, S. (2014). The effect of alendronate on proteome of hepatocellular carcinoma cell lines. International Journal of proteomics, 2014, 0-9.  https://doi.org/10.1155/2014/532953
2013	Siddiqui, S., Khan, I., Zarina, S., & Ali, S. (2013). Use of the SYBR Green dye for measuring helicase activity. Enzyme and microbial technology, 52(3), 196-198. https://doi.org/10.1016/j.enzmictec.2012.12.008
2012	Hashim, Z., & Zarina, S. (2012). Osmotic stress induced oxidative damage: possible mechanism of cataract formation in diabetes. Journal of diabetes and its complications, 26(4), 275-279. https://doi.org/10.1016/j.jdiacomp.2012.04.005
2012	Saleem, A., Azam, S. S., & Zarina, S. (2012). Docking and molecular dynamics simulation studies on glycation-induced conformational changes of human paraoxonase 1. European Biophysics Journal, 41(2), 241-248. https://doi.org/10.1007/s00249-011-0779-z
2011	Hashim, Z., & Zarina, S. (2011). Advanced glycation end products in diabetic and non-diabetic human subjects suffering from cataract. Age, 33(3), 377-384. https://doi.org/10.1007/s11357-010-9177-1
2010	Ul-Haq, Z., Khan, W., Zarina, S., Sattar, R., & Moin, S. T. (2010). Template-based structure prediction and molecular dynamics simulation study of two mammalian Aspartyl-tRNA synthetases. Journal of molecular graphics and Modelling, 28(5), 401-412. https://doi.org/10.1016/j.jmgm.2009.09.006
2009	Hashim, Z., Ilyas, A., Saleem, A., Salim, A., & Zarina, S. (2009). Expression and activity of paraoxonase 1 in human cataractous lens tissue. Free Radical Biology and Medicine, 46(8), 1089-1095. https://doi.org/10.1016/j.freeradbiomed.2009.01.012
2008	Naseeb, U., Shafqat, J., Jägerbrink, T., Zarina, S., Alvestrand, A., Jörnvall, H., & Axelsson, J. (2008). Proteome patterns in uremic plasma. Blood purification, 26(6), 561-568. https://doi.org/10.1159/000178773
2007	Hashim, Z., & Zarina, S. (2007). Assessment of paraoxonase activity and lipid peroxidation levels in diabetic and senile subjects suffering from cataract. Clinical biochemistry, 40(9-10), 705-709. https://doi.org/10.1016/j.clinbiochem.2007.03.015
2006	Hashim, Z., & Zarina, S. (2006). Antioxidant markers in human senile and diabetic cataractous lenses. J Coll Physicians Surg Pak, 16(10), 637-640.
2004	Zarina, S., & Zaidi, Z. H. (2004). Homology modeling of ρ-crystallin from bullfrog (Rana catesbeiana) lens. Journal of Molecular Graphics and Modelling, 22(4), 285-291. https://doi.org/10.1016/j.jmgm.2003.11.003
2002	Thampi, P., Zarina, S., & Abraham, E. C. (2002). α-Crystallin chaperone function in diabetic rat and human lenses. Molecular and cellular biochemistry, 229(1), 113-118. https://doi.org/10.1023/A:1017980713089
2000	Zarina, S., Zhao, H. R., & Abraham, E. (2000). Advanced glycation end products in human senile and diabetic cataractous lenses. Molecular and Cellular Biochemistry, 210(1), 29-34. https://doi.org/10.1023/A:1007015416572
1994	Zarina, S., Zaidi, Z. H., Driessen, H., Srinivasan, N., Slingsby, C., & Jaenicke, R. (1994). Three‐dimensional model and quaternary structure of the human eye lens protein γS‐crystallin based on β‐and γ‐crystallin X‐ray coordinates and ultracentrifugation. Protein Science, 3(10), 1840-1846. https://doi.org/10.1002/pro.5560031023
1994	Zarina, S., Abbasi, A., & Zaidi, Z. H. (1994). Cataractous lens and its environment. Pure and applied chemistry, 66(1), 111-115. https://doi.org/10.1351/pac199466010111
1992	Zarina, S., Abbasi, A., & Zaidi, Z. H. (1992). Primary structure of β s-crystallin from human lens. Biochemical Journal, 287(2), 375-381. https://doi.org/10.1042/bj2870375
1987	Zarina, S., Zaidi, Z. H., & Wania, J. H. (1987). Free amino acids composition of aqueous humor from Pakistani subjects with senile cataract. J Pak Med Assoc, 37(3), 67-70.